U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    H3P16 H3 histone pseudogene 16 [ Homo sapiens (human) ]

    Gene ID: 644914, updated on 17-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    H3P16provided by HGNC
    Official Full Name
    H3 histone pseudogene 16provided by HGNC
    Primary source
    HGNC:HGNC:42982
    See related
    AllianceGenome:HGNC:42982
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    p21; H3.6; H3F3AP6
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See H3P16 in Genome Data Viewer
    Location:
    4q31.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (139697626..139698635, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (143017229..143018238, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (140618780..140619789, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 6908 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:140586532-140587731 Neighboring gene QKI interacting lncRNA Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21929 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21930 Neighboring gene RN7SK pseudogene 237 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:140632274-140633473 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15707 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:140661600-140662100 Neighboring gene uncharacterized LOC124900781 Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene uncharacterized LOC124900782

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8. Taguchi H, et al. Biochemistry, 2017 Apr 25. PMID 28374988
    2. Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler. Gottschalk AJ, et al. Proc Natl Acad Sci U S A, 2009 Aug 18. PMID 19666485, Free PMC Article
    3. The human histone H3 complement anno 2011. Ederveen TH, et al. Biochim Biophys Acta, 2011 Oct. PMID 21782046
    4. Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment. Byron A, et al. Proteomics, 2012 Jul. PMID 22623428, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LncRNA HCG11 enhances the chemosensitivity of non-small cell lung cancer cells to Gemcitabine via miR-17-5p/p21 axis.
      Title: LncRNA HCG11 enhances the chemosensitivity of non-small cell lung cancer cells to Gemcitabine via miR-17-5p/p21 axis.
    2. CPEB2 inhibit cell proliferation through upregulating p21 mRNA stability in glioma.
      Title: CPEB2 inhibit cell proliferation through upregulating p21 mRNA stability in glioma.
    3. P21 resists ferroptosis in osteoarthritic chondrocytes by regulating GPX4 protein stability.
      Title: P21 resists ferroptosis in osteoarthritic chondrocytes by regulating GPX4 protein stability.
    Submit: New GeneRIF Correction

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Other Names

    • H3 histone, family 3A pseudogene
    • H3 histone, family 3A, pseudogene 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022939.1 

      Range
      101..1110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      139697626..139698635 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      143017229..143018238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials